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Cancer research
Cancer is a devastating disease affecting more than 100 million people, globally. It is the uncontrolled growth of cells that eventually can…
Software and Data
Active Decision Boundary Annotation with Deep Generative Models - https://github.com/MiriamHu/ActiveBoundary/tree/master Video Acceleration…
Research
Deep Learning The breakthrough in visual understanding by deep learning is fueled by fast hardware and huge manually annotated datasets. We…
Molecular diagnostics
Many diseases are caused by genetic variations. Predisposition for a disease can thus be derived from studying one's genome. Hence,…
Variant prediction and annotation
Genetic difference between and within species drive how we evolve, but also what causes malfunctioning of genes and phenotypic differences.…
Publications from Pure
MAiA
Introduction MAIA is an algorithm to integrate multiple genome assemblies. For example, assemblies originating from: Different runs of a de…
Software
Peacock (2017): Phylogenies Visualization library PEDCA (2017): Ploidy Estimation by Dynamic Coverage Analysis GenomeTools (2017):…
Computational Neurobiology
The immense complexity of the mammalian brain is largely reflected in the underlying molecular signatures of its billions of cells. Brain…
Single-cell omics
The most recent breakthrough in genomics is the ability to measure within single cells. Data from hundred thousands, even millions of cells,…